"The Orioles respect Major League Baseball's recruiting policies and the governing bodies and people that contribute to the growth of baseball around the world," Duquette said in a release issued Friday night.
It's unclear if the apology will affect the KBA's decision to ban Orioles scouts from attending its games.
Also Friday, the Orioles announced deals with right-hander Luis Ayala and first baseman Nick Johnson, and designated outfielder Matt Angle for assignment.
Ayala agreed to a one-year contract that includes a club option for 2013. The 34-year-old reliever went 2-2 with a 2.09 earned-run average in 52 games with the New York Yankees last season.
Johnson received a minor league deal and was invited to spring training. The oft-injured Johnson hasn't appeared in a major league game since 2010.